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@article{ART001176183},
author={TaeKyung Kim and Cho, Wan-sup},
title={CGRID construction based on Etherboot technology and its utilization to sequence analysis},
journal={Journal of The Korea Society of Computer and Information},
issn={1598-849X},
year={2005},
volume={10},
number={6},
pages={195-208}

TY - JOUR
AU - TaeKyung Kim
AU - Cho, Wan-sup
TI - CGRID construction based on Etherboot technology and its utilization to sequence analysis
JO - Journal of The Korea Society of Computer and Information
PY - 2005
VL - 10
IS - 6
PB - The Korean Society Of Computer And Information
SP - 195
EP - 208
SN - 1598-849X
AB - Recently, amount of the data such as sequences is being increased rapidly due to deploying computational technique and advance of experiment tools in the biological areas. In bioinformatics, it is very significant to extract the knowledge from such huge biological data. Sequence comparisons are most frequently used to predict the function of the genes or proteins. However, it takes so much time to process the persistently increasing data. In this paper, we propose hardware-based grid, CGRID(Chungbuk National University GRID), to improve performance and complement existing middleware-only approach and apply it in the sequence comparison. Hardware-based approach is easy to construct, maintain, and manage the grid as not requiring the software installation individually for every node. We reduce orthologous database construction time from 33 weeks to just a week. Furthermore, CGRID guarantees that the performance increases proportionally as adding the nodes.
KW - Grid Computing;Bioinformatics;Sequence Analysis
DO -
UR -
ER -

TaeKyung Kim and Cho, Wan-sup. (2005). CGRID construction based on Etherboot technology and its utilization to sequence analysis. Journal of The Korea Society of Computer and Information, 10(6), 195-208.

TaeKyung Kim and Cho, Wan-sup. 2005, "CGRID construction based on Etherboot technology and its utilization to sequence analysis", Journal of The Korea Society of Computer and Information, vol.10, no.6 pp.195-208.

TaeKyung Kim, Cho, Wan-sup "CGRID construction based on Etherboot technology and its utilization to sequence analysis" Journal of The Korea Society of Computer and Information 10.6 pp.195-208 (2005) : 195.

TaeKyung Kim, Cho, Wan-sup. CGRID construction based on Etherboot technology and its utilization to sequence analysis. 2005; 10(6), 195-208.

TaeKyung Kim and Cho, Wan-sup. "CGRID construction based on Etherboot technology and its utilization to sequence analysis" Journal of The Korea Society of Computer and Information 10, no.6 (2005) : 195-208.

TaeKyung Kim; Cho, Wan-sup. CGRID construction based on Etherboot technology and its utilization to sequence analysis. Journal of The Korea Society of Computer and Information, 10(6), 195-208.

TaeKyung Kim; Cho, Wan-sup. CGRID construction based on Etherboot technology and its utilization to sequence analysis. Journal of The Korea Society of Computer and Information. 2005; 10(6) 195-208.

TaeKyung Kim, Cho, Wan-sup. CGRID construction based on Etherboot technology and its utilization to sequence analysis. 2005; 10(6), 195-208.

TaeKyung Kim and Cho, Wan-sup. "CGRID construction based on Etherboot technology and its utilization to sequence analysis" Journal of The Korea Society of Computer and Information 10, no.6 (2005) : 195-208.