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An EST Sequence Annotation System Based On Service Oriented Architecture

  • Journal of The Korea Society of Computer and Information
  • Abbr : JKSCI
  • 2008, 13(3), pp.35-44
  • Publisher : The Korean Society Of Computer And Information
  • Research Area : Engineering > Computer Science

남성혁 1 TaeKyung Kim 1 김경란 1 Cho, Wan-sup 1

1충북대학교

Accredited

ABSTRACT

In this paper, we present an EST sequence annotation system based on Service Oriented Architecture, called SeqWeB. We developed the web services of eight applications (Phred, cross_match, RepeatMasker, TGICL, ICAtools, CAP3, Phrap and Blast) which are located in sequence annotation process and integrated the web services through BPEL. SeqWeB uses an XML file format for data input and output to maximize interoperability between each application. SeqWeB can be extended or modified easily through some modification such as insertion, deletion and replacement because service-oriented architecture allows loose coupling between applications.

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