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@article{ART001771872},
author={송은하 and slyong},
title={A Study on layout algorithm for metabolic pathway visualization},
journal={Journal of The Korea Society of Computer and Information},
issn={1598-849X},
year={2013},
volume={18},
number={5},
pages={95-102}

TY - JOUR
AU - 송은하
AU - slyong
TI - A Study on layout algorithm for metabolic pathway visualization
JO - Journal of The Korea Society of Computer and Information
PY - 2013
VL - 18
IS - 5
PB - The Korean Society Of Computer And Information
SP - 95
EP - 102
SN - 1598-849X
AB - In metabolomics, metabolic pathway is represented by well-displayed graph. Metabolic pathways, especially, have a complex binding structure, which makes the graphical representation hard to visualize. There is a problem that edge crossings exponentially increase as the number of nodes grows. To apply automatic graph layout techniques to the genome-scale metabolic flow of metabolism domains, it is very important to reduce unnecessary edge crossing on a metabolic pathway layout. we proposed a metabolic pathway layout algorithm based on 2-layer layout. Our algorithm searches any meaningful component existing in a pathway, such as circular components, highly connected nodes, and the components are drawn in upper layer. Then the remaining subgraphs except meaningful components are drawn in lower layer by utilizing a new radial layout algorithm. It reduces ultimately reduced the number of edge crossings. This algorithm is the basis of flexible analysis for metabolic pathways.
KW - Metabolic pathway;visualization;layout algorithm
DO -
UR -
ER -

송은하 and slyong. (2013). A Study on layout algorithm for metabolic pathway visualization. Journal of The Korea Society of Computer and Information, 18(5), 95-102.

송은하 and slyong. 2013, "A Study on layout algorithm for metabolic pathway visualization", Journal of The Korea Society of Computer and Information, vol.18, no.5 pp.95-102.

송은하, slyong "A Study on layout algorithm for metabolic pathway visualization" Journal of The Korea Society of Computer and Information 18.5 pp.95-102 (2013) : 95.

송은하, slyong. A Study on layout algorithm for metabolic pathway visualization. 2013; 18(5), 95-102.

송은하 and slyong. "A Study on layout algorithm for metabolic pathway visualization" Journal of The Korea Society of Computer and Information 18, no.5 (2013) : 95-102.

송은하; slyong. A Study on layout algorithm for metabolic pathway visualization. Journal of The Korea Society of Computer and Information, 18(5), 95-102.

송은하; slyong. A Study on layout algorithm for metabolic pathway visualization. Journal of The Korea Society of Computer and Information. 2013; 18(5) 95-102.

송은하, slyong. A Study on layout algorithm for metabolic pathway visualization. 2013; 18(5), 95-102.

송은하 and slyong. "A Study on layout algorithm for metabolic pathway visualization" Journal of The Korea Society of Computer and Information 18, no.5 (2013) : 95-102.