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A Study on Web Services for Sequence Similarity search in the Workflow Environment

  • Journal of The Korea Society of Computer and Information
  • Abbr : JKSCI
  • 2008, 13(6), pp.41-50
  • Publisher : The Korean Society Of Computer And Information
  • Research Area : Engineering > Computer Science

정진영 1

1대전보건대학

Accredited

ABSTRACT

In recent years, a life phenomenon using a workflow management tool in bioinformatics has been actively researched. Workflow management tool is the base which enables researchers to collaborate through the re-use and sharing of service, and a variety of workflow management tools including MyGrid project’s Taverna, Kepler and BioWMS have been developed and used as the open source. This workflow management tool can model and automate different services in spatially-distant area in one working space based on the web service technology. Many tools and databases used in the bioinformatics are provided in the web services form and are used in the workflow management tool. In such the situation, the web services development and stable service offering for a sequence similarity search which is basically used in the bioinformatics can be essential in the bioinformatics field. In this paper, the similarity retrieval speed of biology sequence data was improved based on a Linux cluster, and the sequence similarity retrieval could be done for a short time by linking with the workflow management tool through developing it in the web services.

Citation status

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