The computer security is considered important due to the side effect generated from the expansion of computer network and rapid increase of the use of internet. Therefore, Intrusion detection system has been an active research area to reduce the risk from intruders. A number of advantages of using mobile agent computing paradigms have been proposed. These advantages include: overcoming network latency, reducing network load, executing asynchronously and autonomously, adapting dynamically, and operating in heterogeneous environments. Many information security models have been proposed to mitigate agent-to-agent, agent-to-platform, and platform-to-agent element risks. In these paper, We have an object which is that through intrusion detection system development, the mobile agent is managed and through the analysis of performance data, the best environment is served.